Gene: Lsat_1_v5_gn_5_188040
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_5_188040
- Transcript Identifier Lsat_1_v5_gn_5_188040.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_5 : 334745189-334745733 : positive
Gene Family Information
- ID HOM05D001060
- #Genes/#Species 575/98
- Phylogenetic origin
- ID ORTHO05D000905
- #Genes/#Species 561/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_5_188040.v5
- pacid 38970202
Descriptions
- Description PTHR24423:SF563 - PHYTOCHROME E
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009584 | IEA | InterPro | detection of visible light | |
| GO:0018298 | IEA | InterPro | protein-chromophore linkage | |
| GO:0009585 | ISO | PLAZA Homology (enrichment) | red, far-red light phototransduction | HOM05D001060 |
| GO:0007165 | ISO | PLAZA Homology (enrichment) | signal transduction | HOM05D001060 |
| GO:0017006 | ISO | PLAZA Homology (enrichment) | protein-tetrapyrrole linkage | HOM05D001060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000155 | ISO | PLAZA Homology (enrichment) | phosphorelay sensor kinase activity | HOM05D001060 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D001060 |
| GO:0042803 | ISO | PLAZA Homology (enrichment) | protein homodimerization activity | HOM05D001060 |
| GO:0009881 | ISO | PLAZA Homology (enrichment) | photoreceptor activity | HOM05D001060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |