Gene: Lsat_1_v5_gn_4_127421

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_127421
  • Transcript Identifier Lsat_1_v5_gn_4_127421.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 234879311-234883202 : positive

Gene Family Information

  • ID HOM05D002239
  • #Genes/#Species 301/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_127421.v5
  • pacid 38931220

Descriptions

  • Description PF00806//PF02127//PF07990 - Pumilio-family RNA binding repeat (PUF) // Aminopeptidase I zinc metalloprotease (M18) (Peptidase_M18) // Nucleic acid binding protein NABP (NABP)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0061077
ISO
PLAZA Integrative Orthologychaperone-mediated protein folding AT5G60160
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G60160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0004177
IEA
InterProaminopeptidase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0070006
ISO
PLAZA Integrative Orthologymetalloaminopeptidase activity AT5G60160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G60160
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G60160
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G60160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR033712 Pumilio, RNA binding domain
IPR001948 Peptidase M18
IPR016024 Armadillo-type fold
IPR001313 Pumilio RNA-binding repeat
IPR023358 Peptidase M18, domain 2
IPR012940 Nucleic acid binding NABP
IPR011989 Armadillo-like helical
Mapman id Description
19.4.5.6.4 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M18-class aspartyl aminopeptidase (DAP)