Gene: Lsat_1_v5_gn_3_19100

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_3_19100
Transcript Identifier Lsat_1_v5_gn_3_19100.3
Gene Type Coding gene
Location Lsat_1_v8_lg_3 : 25662865-25665147 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000123
#Genes/#Species 2785/100
Phylogenetic origin

ID ORTHO05D000064
#Genes/#Species 2617/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Lsat_1_v5_gn_3_19100.v5
pacid 38915784

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0009408	ISO	PLAZA Integrative Orthology	response to heat	AT5G16820

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0003677	ISO	PLAZA Integrative Orthology	DNA binding	AT5G16820
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G16820

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G02990

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000232	Heat shock factor (HSF)-type, DNA-binding
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR027725	Heat shock transcription factor family

Mapman id	Description
15.5.13	RNA biosynthesis.transcriptional regulation.transcription factor (HSF)