Gene: Lsat_1_v5_gn_1_116661

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_116661
  • Transcript Identifier Lsat_1_v5_gn_1_116661.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 177735361-177738691 : negative

Gene Family Information

  • ID HOM05D001159
  • #Genes/#Species 533/100
  • Phylogenetic origin
  • ID ORTHO05D230016
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_116661.v5
  • pacid 38945091

Descriptions

  • Description PF04811//PF08033 - Sec23/Sec24 trunk domain (Sec23_trunk) // Sec23/Sec24 beta-sandwich domain (Sec23_BS)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0090114
ISO
PLAZA Homology (enrichment)COPII-coated vesicle budding HOM05D001159

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D001159

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030127
IEA
InterProCOPII vesicle coat

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012990 Sec23/Sec24 beta-sandwich
IPR036465 von Willebrand factor A-like domain superfamily
IPR037364 Protein transport protein Sec23
IPR006896 Sec23/Sec24, trunk domain
Mapman id Description
22.1.1.1.3.1 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec23