Gene: Lsat_1_v5_gn_0_22040

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_0_22040
Transcript Identifier Lsat_1_v5_gn_0_22040.1
Gene Type Coding gene
Location Lsat_1_v8_lg_0 : 49144796-49148039 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000631
#Genes/#Species 901/98
Phylogenetic origin

ID ORTHO05D000524
#Genes/#Species 814/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Lsat_1_v5_gn_0_22040.v5
pacid 38936409

Descriptions

Short descriptions
Ortholog descriptions

Description K16280 - E3 ubiquitin-protein ligase RGLG [EC:6.3.2.19] (RGLG)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009690	ISO	PLAZA Integrative Orthology	cytokinin metabolic process	AT5G14420
GO:0070534	ISO	PLAZA Integrative Orthology	protein K63-linked ubiquitination	AT3G01650
GO:0009850	ISO	PLAZA Integrative Orthology	auxin metabolic process	AT5G14420
GO:0080148	ISO	PLAZA Integrative Orthology	negative regulation of response to water deprivation	AT5G14420
GO:0009789	ISO	PLAZA Integrative Orthology	positive regulation of abscisic acid-activated signaling pathway	AT3G01650

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT5G14420
GO:0061630	ISO	PLAZA Integrative Orthology	ubiquitin protein ligase activity	AT3G01650
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G14420

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G14420
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G14420

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002035	von Willebrand factor, type A
IPR010734	Copine, C-terminal
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR036465	von Willebrand factor A-like domain superfamily

Mapman id	Description
19.2.2.1.4.3.2	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
19.2.2.1.5.2	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG)