Gene: Lsat_1_v5_gn_0_14741

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_0_14741
  • Transcript Identifier Lsat_1_v5_gn_0_14741.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_0 : 12868972-12873080 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_0_14741.v5
  • pacid 38935810

Descriptions

  • Description PF00270//PF00271//PF03368 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Dicer dimerisation domain (Dicer_dimer)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
ISO
PLAZA Homology (enrichment)RNA processing HOM05D000399

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0004525
ISO
PLAZA Homology (enrichment)ribonuclease III activity HOM05D000399

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038248 Dicer dimerisation domain superfamily
Mapman id Description
35.1 not assigned.annotated