Gene: Lj5g0017417
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj5g0017417
- Transcript Identifier Lj5g0017417.1
- Gene Type Coding gene
- Location chr5 : 43289490-43291337 : negative
Gene Family Information
- ID HOM05D001283
- #Genes/#Species 488/96
- Phylogenetic origin
- ID ORTHO05D001109
- #Genes/#Species 483/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lj5g0017417.Lj1.0v1
- pacid 44926114
Descriptions
- Description PTHR23147//PTHR23147:SF6 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT3G13570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G13570 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G13570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT3G13570 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G13570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.6.2 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33) |