Gene: Lj5A54T62

General Information

Structural Information

  • Species Lonicera japonica
  • Gene Identifier Lj5A54T62
  • Transcript Identifier Lj5A54T62.1
  • Gene Type Coding gene
  • Location GWHAAZE00000005 : 5431846-5434921 : positive

Gene Family Information

  • ID HOM05D001613
  • #Genes/#Species 400/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Lj5A54T62.1
  • Accession GWHGAAZE017382
  • Accession GWHTAAZE017402

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT1G15215
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT1G15215
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT1G15215

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
InterProchromatin binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039276 Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2
IPR009057 Homeobox-like domain superfamily
IPR032001 SAWADEE domain
Mapman id Description
12.5.1.7 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH)