Gene: Lj4g0016470
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj4g0016470
- Transcript Identifier Lj4g0016470.1
- Gene Type Coding gene
- Location chr4 : 74988222-74991786 : negative
Gene Family Information
- ID HOM05D002013
- #Genes/#Species 329/98
- Phylogenetic origin
- ID ORTHO05D002293
- #Genes/#Species 300/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lj4g0016470.Lj1.0v1
- pacid 44936790
Descriptions
- Description PF01535//PF02878//PF02879//PF13041 - PPR repeat (PPR) // Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I (PGM_PMM_I) // Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II (PGM_PMM_II) // PPR repeat family (PPR_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0048229 | ISO | PLAZA Integrative Orthology | gametophyte development | AT1G70730 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G23190 |
| GO:0071704 | ISO | PLAZA Homology (enrichment) | organic substance metabolic process | HOM05D002013 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016868 | IEA | InterPro | intramolecular transferase activity, phosphotransferases | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004614 | ISO | PLAZA Integrative Orthology | phosphoglucomutase activity | Zm00001eb054980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G23190 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G23190 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G70730 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G23190 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005841 | Alpha-D-phosphohexomutase superfamily |
| IPR016055 | Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| IPR005845 | Alpha-D-phosphohexomutase, alpha/beta/alpha domain II |
| IPR005844 | Alpha-D-phosphohexomutase, alpha/beta/alpha domain I |
| Mapman id | Description |
|---|---|
| 50.5.4 | Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase |