Gene: Lj2g0003212

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj2g0003212
  • Transcript Identifier Lj2g0003212.1
  • Gene Type Coding gene
  • Location chr2 : 11036087-11037922 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj2g0003212.Lj1.0v1
  • pacid 44930946

Descriptions

  • Description PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT5G66520
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT2G02980
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT5G66520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G66520

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G02980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.50 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP85)