Gene: Lj2g0003212
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj2g0003212
- Transcript Identifier Lj2g0003212.1
- Gene Type Coding gene
- Location chr2 : 11036087-11037922 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Lj2g0003212.Lj1.0v1
- pacid 44930946
Descriptions
- Description PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:1900865 | ISO | PLAZA Integrative Orthology | chloroplast RNA modification | AT5G66520 |
GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | AT2G02980 |
GO:0016554 | ISO | PLAZA Integrative Orthology | cytidine to uridine editing | AT5G66520 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0005515 | IEA | InterPro | protein binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G66520 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G02980 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.11.3.3.4.50 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP85) |