Gene: HanXRQChr10g0296181

General Information

Structural Information

Species Helianthus annuus
Gene Identifier HanXRQChr10g0296181
Transcript Identifier HanXRQChr10g0296181.r1.2.494
Gene Type Coding gene
Location HanXRQChr10 : 117530310-117534845 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000032
#Genes/#Species 5307/100
Phylogenetic origin

ID ORTHO05D002561
#Genes/#Species 279/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id HanXRQChr10g0296181.r1.2
pacid 40295582

Descriptions

Short descriptions
Ortholog descriptions

Description Putative uvrABC system, subunit B; DEAD/DEAH box helicase domain; RNA helicase, DEAD-box type, Q motif; P-loop containing nucleoside triphosphate hydrolase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc03g112350.4

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc03g112350.4
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G63120

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011545	DEAD/DEAH box helicase domain
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR001650	Helicase, C-terminal

Mapman id	Description
16.2.1.1.4	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing regulator (DDX5)