Gene: HPP92_016644

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_016644
  • Transcript Identifier Vpl08Ag16644.1
  • Gene Type Coding gene
  • Location CM028157.1 : 15492499-15502873 : negative

Gene Family Information

  • ID HOM05D001363
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl08Ag16644.1
  • pid KAG0469944.1

Descriptions

  • Description DNA repair protein RAD51 homolog *-*
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G20850
GO:0045003
ISO
PLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealing AT5G20850
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation AT5G20850
GO:0006259
ISO
PLAZA Integrative OrthologyDNA metabolic process AT5G20850
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT5G20850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
ISO
PLAZA Homology (enrichment)nucleotide binding HOM05D001363
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D001363
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20850
GO:0005694
ISO
PLAZA Integrative Orthologychromosome AT5G20850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
Mapman id Description
35.1 not assigned.annotated