Gene: HPP92_016051

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_016051
  • Transcript Identifier Vpl07Ag16051.1
  • Gene Type Coding gene
  • Location CM028156.1 : 41156100-41172159 : negative

Gene Family Information

  • ID HOM05D002142
  • #Genes/#Species 313/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl07Ag16051.1
  • pid KAG0474194.1

Descriptions

  • Description Nuclear pore complex protein *-*
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
ISO
PLAZA Integrative OrthologymRNA export from nucleus AT1G10390
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT1G10390
GO:0006913
ISO
PLAZA Homology (enrichment)nucleocytoplasmic transport HOM05D002142
GO:1902446
ISO
PLAZA Integrative Orthologyregulation of shade avoidance AT1G10390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G10390
GO:0017056
ISO
PLAZA Homology (enrichment)structural constituent of nuclear pore HOM05D002142

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IEA
InterPronuclear pore
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G10390
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G10390
GO:0031965
ISO
PLAZA Integrative Orthologynuclear membrane AT1G10390
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G10390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR037665 Nucleoporin peptidase S59-like
Mapman id Description
35.1 not assigned.annotated