Gene: HPP92_000103

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_000103
  • Transcript Identifier Vpl01Ag00103.1
  • Gene Type Coding gene
  • Location CM028150.1 : 1364084-1386167 : positive

Gene Family Information

  • ID HOM05D002411
  • #Genes/#Species 281/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl01Ag00103.1
  • pid KAG0495412.1

Descriptions

  • Description U1 small nuclear ribonucleoprotein ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G47580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G47580
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G47580
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G47580
GO:0005685
ISO
PLAZA Integrative OrthologyU1 snRNP AT2G47580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.1.1.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1A)