Gene: Gohir.A09G112000

General Information

Structural Information

Species Gossypium hirsutum
Gene Identifier Gohir.A09G112000
Transcript Identifier Gohir.A09G112000.2
Gene Type Coding gene
Location A09 : 68472229-68476836 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000857
#Genes/#Species 696/96
Phylogenetic origin

ID ORTHO05D001382
#Genes/#Species 419/92
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Gohir.A09G112000.v2.1
pacid 42425720

Descriptions

Short descriptions
Ortholog descriptions

Description PF00642//PF13893 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5)

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Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046872	IEA	InterPro	metal ion binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G51520

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR034365	AtC3H46-like, RNA recognition motif
IPR036855	Zinc finger, CCCH-type superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000571	Zinc finger, CCCH-type
IPR035979	RNA-binding domain superfamily

Mapman id	Description
15.5.16	RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF)