Gene: Glyma.08G085900

General Information

Structural Information

  • Species Glycine max
  • Gene Identifier Glyma.08G085900
  • Transcript Identifier Glyma.08G085900.3
  • Gene Type Coding gene
  • Location Gm08 : 6479099-6481579 : negative

Gene Family Information

  • ID HOM05D000347
  • #Genes/#Species 1366/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Glyma.08G085900.Wm82.a4.v1
  • pacid 41113444
  • synonym Glyma08g09090

Descriptions

  • Description K10752 - histone-binding protein RBBP4 (RBBP4, HAT2, CAF1, MIS16)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT5G58230
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT5G58230
GO:2000653
ISO
PLAZA Integrative Orthologyregulation of genetic imprinting AT5G58230
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G58230
GO:0031507
ISO
PLAZA Integrative Orthologyheterochromatin assembly AT5G58230
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT5G58230
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT5G58230
GO:0045787
ISO
PLAZA Integrative Orthologypositive regulation of cell cycle AT5G58230
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G58230
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G58230
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G58230
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development AT5G58230
GO:0070828
ISO
PLAZA Integrative Orthologyheterochromatin organization AT5G58230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G58230
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT5G58230
GO:0005677
ISO
PLAZA Integrative Orthologychromatin silencing complex AT5G58230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR022052 Histone-binding protein RBBP4, N-terminal
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
12.2.1.3 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1c/MSI
12.3.3.2.1.1.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component MSI1