Gene: FvH4_1g24670

General Information

Structural Information

  • Species Fragaria vesca
  • Gene Identifier FvH4_1g24670
  • Transcript Identifier FvH4_1g24670.t2
  • Gene Type Coding gene
  • Location Fvb1 : 16487924-16492933 : negative

Gene Family Information

  • ID HOM05D000631
  • #Genes/#Species 901/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id FvH4_1g24670.v4.0.a2
  • pacid 50692728

Descriptions

  • Description PTHR10857//PTHR10857:SF18 - COPINE // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G63970
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT5G63970
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G63970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G63970
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G63970
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G63970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010734 Copine, C-terminal
IPR001841 Zinc finger, RING-type
IPR002035 von Willebrand factor, type A
IPR036465 von Willebrand factor A-like domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
19.2.2.1.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG)