Gene: FAN26G0991
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN26G0991
- Transcript Identifier FAN26G0991.1
- Gene Type Coding gene
- Location Fvb1-2 : 17355720-17368550 : negative
Gene Family Information
- ID HOM05D002097
- #Genes/#Species 318/100
- Phylogenetic origin
- ID ORTHO05D002248
- #Genes/#Species 304/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb1-2-processed-gene-173.5.v1.0.a1
- pacid 50466797
Descriptions
- Description PF00076//PF01918//PF15519 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Alba (Alba) // linker between RRM2 and RRM3 domains in RBM39 protein (RBM39linker)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | InterPro | mRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029123 | Splicing factor RBM39, linker |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036882 | Alba-like domain superfamily |
| IPR002775 | DNA/RNA-binding protein Alba-like |
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR006509 | Splicing factor, RBM39-like |
| Mapman id | Description |
|---|---|
| 16.6.3.6 | RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component RPP25/POP6 or RPP20/POP7 |