Gene: FAN23G1418
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN23G1418
- Transcript Identifier FAN23G1418.1
- Gene Type Coding gene
- Location Fvb1-3 : 4608300-4610573 : negative
Gene Family Information
- ID HOM05D001363
- #Genes/#Species 458/99
- Phylogenetic origin
- ID ORTHO05D002212
- #Genes/#Species 307/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb1-3-snap-gene-46.58.v1.0.a1
- pacid 50505995
Descriptions
- Description PF13481//PF14520 - AAA domain (AAA_25) // Helix-hairpin-helix domain (HHH_5)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT5G20850 |
| GO:0045003 | ISO | PLAZA Integrative Orthology | double-strand break repair via synthesis-dependent strand annealing | AT5G20850 |
| GO:0010332 | ISO | PLAZA Integrative Orthology | response to gamma radiation | AT5G20850 |
| GO:0006259 | ISO | PLAZA Integrative Orthology | DNA metabolic process | AT5G20850 |
| GO:0006302 | ISO | PLAZA Integrative Orthology | double-strand break repair | AT5G20850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20850 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G20850 |
| GO:0005694 | ISO | PLAZA Integrative Orthology | chromosome | AT5G20850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016467 | DNA recombination and repair protein, RecA-like |
| IPR010995 | DNA repair Rad51/transcription factor NusA, alpha-helical |
| IPR013632 | DNA recombination and repair protein Rad51-like, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR033925 | Rad51/DMC1/RadA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |