Gene: FAN20G1414
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN20G1414
- Transcript Identifier FAN20G1414.1
- Gene Type Coding gene
- Location Fvb2-3 : 3517894-3520050 : positive
Gene Family Information
- ID HOM05D002795
- #Genes/#Species 248/99
- Phylogenetic origin
- ID ORTHO05D003219
- #Genes/#Species 237/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb2-3-processed-gene-35.4.v1.0.a1
- pacid 50563268
Descriptions
- Description K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011010 | DNA breaking-rejoining enzyme, catalytic core |
| IPR014711 | DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type |
| IPR025834 | Topoisomerase I C-terminal domain |
| IPR013030 | DNA topoisomerase I, DNA binding, N-terminal domain 2 |
| IPR013500 | DNA topoisomerase I, catalytic core, eukaryotic-type |
| IPR008336 | DNA topoisomerase I, DNA binding, eukaryotic-type |
| IPR013034 | DNA topoisomerase I, DNA binding, N-terminal domain 1 |
| IPR014727 | DNA topoisomerase I, catalytic core, alpha/beta subdomain |
| IPR001631 | DNA topoisomerase I |
| IPR036202 | DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamily |
| IPR013499 | DNA topoisomerase I, eukaryotic-type |
| Mapman id | Description |
|---|---|
| 13.2.1.5 | Cell cycle organisation.DNA replication.preinitiation.DNA topoisomerase (TOP1) |