Gene: FAN19G0277

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN19G0277
  • Transcript Identifier FAN19G0277.1
  • Gene Type Coding gene
  • Location Fvb1-4 : 9863867-9873999 : negative

Gene Family Information

  • ID HOM05D001882
  • #Genes/#Species 349/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb1-4-snap-gene-98.65.v1.0.a1
  • pacid 50557736

Descriptions

  • Description PF01293//PF01535//PF14432 - Phosphoenolpyruvate carboxykinase (PEPCK_ATP) // PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006094
IEA
InterProgluconeogenesis
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G37870
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT4G37870
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G37870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004612
IEA
InterProphosphoenolpyruvate carboxykinase (ATP) activity
GO:0005524
IEA
InterProATP binding
GO:0004611
IEA
InterProphosphoenolpyruvate carboxykinase activity
GO:0017076
IEA
InterPropurine nucleotide binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G37870
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G37870
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G37870
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G37870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising
IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal
IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.6 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF8-group)
3.10.1 Carbohydrate metabolism.gluconeogenesis.phosphoenolpyruvate carboxykinase