Gene: FAN09G3541
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN09G3541
- Transcript Identifier FAN09G3541.1
- Gene Type Coding gene
- Location Fvb6-2 : 22560198-22562819 : positive
Gene Family Information
- ID HOM05D003050
- #Genes/#Species 225/97
- Phylogenetic origin
- ID ORTHO05D003513
- #Genes/#Species 219/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id snap_masked-Fvb6-2-processed-gene-225.20.v1.0.a1
- pacid 50469256
Descriptions
- Description PF00749//PF03950 - tRNA synthetases class I (E and Q), catalytic domain (tRNA-synt_1c) // tRNA synthetases class I (E and Q), anti-codon binding domain (tRNA-synt_1c_C)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0043039 | IEA | InterPro | tRNA aminoacylation | |
| GO:0006424 | ISO | PLAZA Homology (enrichment) | glutamyl-tRNA aminoacylation | HOM05D003050 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004818 | ISO | PLAZA Homology (enrichment) | glutamate-tRNA ligase activity | HOM05D003050 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G26710 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011035 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily |
| IPR020056 | Ribosomal protein L25/Gln-tRNA synthetase, N-terminal |
| IPR020059 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain |
| IPR020061 | Glutamine-tRNA ligase, alpha-bundle domain superfamily |
| IPR020058 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |