Gene: FAN05G5158

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN05G5158
  • Transcript Identifier FAN05G5158.1
  • Gene Type Coding gene
  • Location Fvb6-3 : 37847176-37850585 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb6-3-augustus-gene-378.37.v1.0.a1
  • pacid 50502886

Descriptions

  • Description K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010498
ISO
PLAZA Integrative Orthologyproteasomal protein catabolic process AT1G09100
GO:0010255
ISO
PLAZA Integrative Orthologyglucose mediated signaling pathway AT1G09100
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT3G05530
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G09100
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G09100
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G09100
GO:0030163
IEA
InterProprotein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09100
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT3G05530
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
InterProATP binding
GO:0036402
IEA
InterProproteasome-activating activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G09100
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT1G09100
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G05530
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09100
GO:0005737
IEA
InterProcytoplasm
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT1G09100
GO:0008540
ISO
PLAZA Integrative Orthologyproteasome regulatory particle, base subcomplex AT3G05530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041569 AAA ATPase, AAA+ lid domain
IPR005937 26S proteasome regulatory subunit P45-like
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
IPR032501 Proteasomal ATPase OB C-terminal domain
Mapman id Description
19.2.5.2.1.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT5