Gene: FAN01G0880
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN01G0880
- Transcript Identifier FAN01G0880.1
- Gene Type Coding gene
- Location Fvb7-4 : 3705221-3711209 : negative
Gene Family Information
- ID HOM05D001058
- #Genes/#Species 576/98
- Phylogenetic origin
- ID ORTHO05D000911
- #Genes/#Species 559/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-4-snap-gene-37.73.v1.0.a1
- pacid 50541477
Descriptions
- Description PF00081//PF00656//PF02777//PF06943 - Iron/manganese superoxide dismutases, alpha-hairpin domain (Sod_Fe_N) // Caspase domain (Peptidase_C14) // Iron/manganese superoxide dismutases, C-terminal domain (Sod_Fe_C) // LSD1 zinc finger (zf-LSD1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006801 | IEA | InterPro | superoxide metabolic process | |
| GO:0043069 | ISO | PLAZA Integrative Orthology | negative regulation of programmed cell death | AT4G25110 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004784 | IEA | InterPro | superoxide dismutase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036324 | Manganese/iron superoxide dismutase, N-terminal domain superfamily |
| IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily |
| IPR005735 | Zinc finger, LSD1-type |
| IPR001189 | Manganese/iron superoxide dismutase |
| IPR019832 | Manganese/iron superoxide dismutase, C-terminal |
| IPR033180 | Metacaspase type I, plant |
| IPR019831 | Manganese/iron superoxide dismutase, N-terminal |
| Mapman id | Description |
|---|---|
| 10.2.1.1 | Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.iron superoxide dismutase (FSD) |
| 15.6.1.2.2.9 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP9/FSD2 |
| 27.2.4.2 | Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.metacaspase-like regulator (MCP1) |