Gene: EL10Ac4g08848

General Information

Structural Information

  • Species Beta vulgaris
  • Gene Identifier EL10Ac4g08848
  • Transcript Identifier EL10Ac4g08848.1
  • Gene Type Coding gene
  • Location Chr4_EL10_PGA_scaffold1 : 33876308-33878752 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id EL10Ac4g08848.EL10_1.0
  • pacid 43399632

Descriptions

  • Description PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016556
ISO
PLAZA Integrative OrthologymRNA modification AT1G11290
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT3G22690
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT3G22690
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT3G22690
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G22690
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G22690
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT3G12770
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT3G22690
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT3G22690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G11290
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT1G11290
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G22690
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G12770
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G19720
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G19720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.45 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CRR22)