Gene: Duzib138G1688

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib138G1688
  • Transcript Identifier Duzib138G1688.01
  • Gene Type Coding gene
  • Location NW_019167893.1 : 10112964-10117933 : positive

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111305542
  • name XM_022903182.1
  • pid XP_022758917.1
  • id gene-LOC111305542
  • uniprot A0A6P6A2D6

Descriptions

  • product phytochrome C-like, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050896
IEA
GOA Databaseresponse to stimulus
GO:0017006
IEA
GOA Databaseprotein-tetrapyrrole linkage
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0009584
IEA
GOA Databasedetection of visible light
GO:0009584
IEA
InterProdetection of visible light
GO:0007165
IEA
GOA Databasesignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0018298
IEA
GOA Databaseprotein-chromophore linkage
GO:0018298
IEA
InterProprotein-chromophore linkage
GO:0000160
IEA
GOA Databasephosphorelay signal transduction system

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000155
IEA
GOA Databasephosphorelay sensor kinase activity
GO:0000155
IEA
InterProphosphorelay sensor kinase activity
GO:0042803
IEA
GOA Databaseprotein homodimerization activity
GO:0005515
IEA
InterProprotein binding
GO:0009881
IEA
GOA Databasephotoreceptor activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000014 PAS domain
IPR003018 GAF domain
IPR013515 Phytochrome, central region
IPR003594 Histidine kinase/HSP90-like ATPase
IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR029016 GAF-like domain superfamily
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR035965 PAS domain superfamily
IPR013767 PAS fold
IPR044767 Phytochrome A/B/C/D/E-like, histidine-kinase-related domain
IPR043150 Phytochrome, PHY domain
IPR001294 Phytochrome
IPR013654 PAS fold-2
Mapman id Description
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)