Gene: Duzib093G1671
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib093G1671
- Transcript Identifier Duzib093G1671.01
- Gene Type Coding gene
- Location NW_019167937.1 : 4156504-4160038 : positive
Gene Family Information
- ID HOM05D000250
- #Genes/#Species 1697/100
- Phylogenetic origin
- ID ORTHO05D004181
- #Genes/#Species 188/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name LOC111311789
- name XM_022911483.1
- pid XP_022767218.1
- id gene-LOC111311789
- uniprot A0A6P6AQZ9
Descriptions
- product DEAD-box ATP-dependent RNA helicase 38-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G53110 |
| GO:0016973 | ISO | PLAZA Integrative Orthology | poly(A)+ mRNA export from nucleus | AT3G53110 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G53110 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT3G53110 |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc04g082790.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G53110 |
| GO:0008186 | ISO | PLAZA Integrative Orthology | ATPase, acting on RNA | AT3G53110 |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003724 | IEA | GOA Database | RNA helicase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G53110 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G53110 |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT3G53110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.10.3.1 | RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.ATP-dependent helicase (DBP5/LOS4) |