Gene: Cre09.g388400
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre09.g388400
- Transcript Identifier Cre09.g388400.t1.2
- Gene Type Coding gene
- Location chromosome_9 : 2879103-2881092 : negative
Gene Family Information
- ID HOM05D001544
- #Genes/#Species 413/100
- Phylogenetic origin
- ID ORTHO05D002732
- #Genes/#Species 266/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre09.g388400.v5.5
- pacid 30780782
- alias g9532.t1
- geneName RAT1
- uniprot A0FK50
Descriptions
- Description Chloroplast tscA maturation factor
- Description Thylakoid membrane protein necessary for 3' end maturation of tscA mRNA, hence for psaA trans-splicing of exons 1 and 2 [PMID: 16115062]; has homologues of unknown function in a broad range of organisms; reported similarity to NAD binding domain of PARP
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | ISO | PLAZA Integrative Orthology | metal ion binding | AT2G16460 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G16460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR024461 | Coiled-coil domain-containing protein 90-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |