Gene: Cre06.g275900

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre06.g275900
  • Transcript Identifier Cre06.g275900.t1.2
  • Gene Type Coding gene
  • Location chromosome_6 : 3192762-3193712 : negative

Gene Family Information

  • ID HOM05D001085
  • #Genes/#Species 565/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre06.g275900.v5.5
  • pacid 30778835
  • alias g6185.t1
  • geneName HON2
  • uniprot Q39576

Descriptions

  • Description Histone H1 associated with replication linked cluster IV; not H1A of Morris et al. 1990 [PMID: 2319488]. Likely H1B [PMID: 7480339]. ChromoDB HON3401
  • Description Histone H1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT2G18050
GO:0006334
IEA
GOA Databasenucleosome assembly
GO:0006334
IEA
InterPronucleosome assembly
GO:0030261
IBA
GOA Databasechromosome condensation
GO:0016584
IBA
GOA Databasenucleosome positioning
GO:0031936
IBA
GOA Databasenegative regulation of chromatin silencing
GO:0045910
IBA
GOA Databasenegative regulation of DNA recombination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0031492
IBA
GOA Databasenucleosomal DNA binding
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G30620
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G30620
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005694
IEA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005818 Linker histone H1/H5, domain H15
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR005819 Linker histone H1/H5
Mapman id Description
12.1.2.1 Chromatin organisation.chromatin structure.DNA bridging.linker histone (H1)