Gene: Cpa.g.sc470.3

General Information

Structural Information

  • Species Carica papaya
  • Gene Identifier Cpa.g.sc470.3
  • Transcript Identifier Cpa.t.sc470.3
  • Gene Type Coding gene
  • Location supercontig_470 : 31997-36873 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 16420703
  • tid PAC:16420703
  • id evm.TU.supercontig_470.3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc12g035130.2
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT3G01540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
InterProprotein binding
GO:0016887
ISO
PLAZA Integrative OrthologyATP hydrolysis activity AT3G01540
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc12g035130.2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G14610
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G14610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR001202 WW domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036020 WW domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated