Gene: Cfa027227
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa027227
- Transcript Identifier Cfa027227.t1
- Gene Type Coding gene
- Location scaffold1072 : 2731-2922 : negative
Gene Family Information
- ID HOM05D001179
- #Genes/#Species 528/100
- Phylogenetic origin
- ID ORTHO05D003685
- #Genes/#Species 209/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa027227.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006801 | IEA | InterPro | superoxide metabolic process | |
| GO:0010043 | ISO | PLAZA Integrative Orthology | response to zinc ion | AT3G10920 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G10920 |
| GO:0019430 | ISO | PLAZA Integrative Orthology | removal of superoxide radicals | AT3G10920 |
| GO:0010227 | ISO | PLAZA Integrative Orthology | floral organ abscission | AT3G56350 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G10920 |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D001179 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004784 | IEA | InterPro | superoxide dismutase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT3G10920 |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D001179 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10920 |
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D001179 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036324 | Manganese/iron superoxide dismutase, N-terminal domain superfamily |
| IPR001189 | Manganese/iron superoxide dismutase |
| IPR019831 | Manganese/iron superoxide dismutase, N-terminal |
| IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily |
| IPR019832 | Manganese/iron superoxide dismutase, C-terminal |
| Mapman id | Description |
|---|---|
| 10.2.1.2 | Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.manganese superoxide dismutase (MSD) |