Gene: Cfa026290
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa026290
- Transcript Identifier Cfa026290.t1
- Gene Type Coding gene
- Location scaffold84 : 24037-26187 : positive
Gene Family Information
- ID HOM05D000070
- #Genes/#Species 3945/100
- Phylogenetic origin
- ID ORTHO05D004358
- #Genes/#Species 183/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Cfa026290.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010498 | ISO | PLAZA Integrative Orthology | proteasomal protein catabolic process | AT1G09100 |
| GO:0010255 | ISO | PLAZA Integrative Orthology | glucose mediated signaling pathway | AT1G09100 |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT3G05530 |
| GO:0006357 | ISO | PLAZA Integrative Orthology | regulation of transcription by RNA polymerase II | AT1G09100 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G09100 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G09100 |
| GO:0030163 | IEA | InterPro | protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G09100 |
| GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT3G05530 |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0036402 | IEA | InterPro | proteasome-activating activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G09100 |
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT1G09100 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G05530 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G09100 |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0000502 | ISO | PLAZA Integrative Orthology | proteasome complex | AT1G09100 |
| GO:0008540 | ISO | PLAZA Integrative Orthology | proteasome regulatory particle, base subcomplex | AT3G05530 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032501 | Proteasomal ATPase OB C-terminal domain |
| IPR005937 | 26S proteasome regulatory subunit P45-like |
| IPR003959 | ATPase, AAA-type, core |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR041569 | AAA ATPase, AAA+ lid domain |
| IPR003593 | AAA+ ATPase domain |
| IPR035254 | 26S Proteasome regulatory subunit 6A |
| Mapman id | Description |
|---|---|
| 19.2.5.2.1.5 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT5 |