Gene: Cfa025350

General Information

Structural Information

  • Species Carpinus fangiana
  • Gene Identifier Cfa025350
  • Transcript Identifier Cfa025350.t1
  • Gene Type Coding gene
  • Location scaffold46 : 147508-148253 : positive

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin
  • ID ORTHO05D125930
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Cfa025350.t1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009584
IEA
InterProdetection of visible light
GO:0018298
IEA
InterProprotein-chromophore linkage
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0007165
IEA
InterProsignal transduction
GO:0009585
ISO
PLAZA Homology (enrichment)red, far-red light phototransduction HOM05D001060
GO:0017006
ISO
PLAZA Homology (enrichment)protein-tetrapyrrole linkage HOM05D001060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000155
IEA
InterProphosphorelay sensor kinase activity
GO:0005515
IEA
InterProprotein binding
GO:0042803
ISO
PLAZA Homology (enrichment)protein homodimerization activity HOM05D001060
GO:0009881
ISO
PLAZA Homology (enrichment)photoreceptor activity HOM05D001060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR013515 Phytochrome, central region
IPR003594 Histidine kinase/HSP90-like ATPase
IPR001789 Signal transduction response regulator, receiver domain
IPR043150 Phytochrome, PHY domain
IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR013654 PAS fold-2
IPR029016 GAF-like domain superfamily
IPR035965 PAS domain superfamily
IPR003018 GAF domain
IPR011006 CheY-like superfamily
IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily
IPR001294 Phytochrome
Mapman id Description
35.1 not assigned.annotated