Gene: Cc10_g05960

General Information

Structural Information

Species Coffea canephora
Gene Identifier Cc10_g05960
Transcript Identifier Cc10_g05960.1
Gene Type Coding gene
Location chr10 : 4888273-4890144 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

UniProtKB Q3E6Q1
UniProtKB Q0WNP3
UniProtKB B9RJD6
UniProtKB F6H0P3
UniProtKB Q9STE1
UniProtKB B9H778
id GSCOCG00034731001

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat-containing protein At4g18520

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT4G18520
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT4G18520

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT4G18520

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G18520

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
16.11.3.3.4.39	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (SEL1/PDM1)