Gene: Cc09_g06460

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc09_g06460
  • Transcript Identifier Cc09_g06460.1
  • Gene Type Coding gene
  • Location chr9 : 7391811-7393607 : positive

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9XJ60
  • UniProtKB E9JTV4
  • UniProtKB O64645
  • UniProtKB O82743
  • UniProtKB A5A3Z8
  • UniProtKB E9JTV5
  • id GSCOCG00005094001

Descriptions

  • Description Putative MADS-box protein SOC1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
ISO
PLAZA Homology (enrichment)positive regulation of transcription by RNA polymerase II HOM05D000042

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000042
GO:0000977
ISO
PLAZA Homology (enrichment)RNA polymerase II transcription regulatory region sequence-specific DNA binding HOM05D000042
GO:0046983
ISO
PLAZA Homology (enrichment)protein dimerization activity HOM05D000042

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002487 Transcription factor, K-box
Mapman id Description
35.1 not assigned.annotated