Gene: Cc07_g15620

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc07_g15620
  • Transcript Identifier Cc07_g15620.1
  • Gene Type Coding gene
  • Location chr7 : 12407106-12408636 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB G0KZ22
  • UniProtKB Q42429
  • UniProtKB Q6H711
  • UniProtKB D7SW17
  • UniProtKB B6T4Z8
  • UniProtKB Q0D4T4
  • id GSCOCG00036454001

Descriptions

  • Description Putative AGAMOUS-like 104
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D000042

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000981
IEA
InterProDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987
IEA
InterProcis-regulatory region sequence-specific DNA binding
GO:0003700
ISO
PLAZA Homology (enrichment)DNA-binding transcription factor activity HOM05D000042
GO:0000977
ISO
PLAZA Homology (enrichment)RNA polymerase II transcription regulatory region sequence-specific DNA binding HOM05D000042

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D000042

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
IPR033897 MADS SRF-like
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)