Gene: Cc06_g18610

General Information

Structural Information

Species Coffea canephora
Gene Identifier Cc06_g18610
Transcript Identifier Cc06_g18610.1
Gene Type Coding gene
Location chr6 : 18982352-18984145 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

UniProtKB Q9FND7
UniProtKB Q9FI80
UniProtKB Q9FJY7
UniProtKB I1LYG2
UniProtKB F6H9I8
UniProtKB B9N0R5
id GSCOCG00040485001

Descriptions

Short descriptions
Ortholog descriptions

Description Putative Pentatricopeptide repeat-containing protein At5g66520

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT5G66520
GO:0016554	ISO	PLAZA Integrative Orthology	cytidine to uridine editing	AT5G66520

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G66520

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G66520

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.21	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF37)