Gene: Cc05_g03370
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc05_g03370
- Transcript Identifier Cc05_g03370.1
- Gene Type Coding gene
- Location chr5 : 14666949-14671258 : positive
Gene Family Information
- ID HOM05D000924
- #Genes/#Species 651/100
- Phylogenetic origin
- ID ORTHO05D001209
- #Genes/#Species 456/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB Q9VUV9
- UniProtKB F1NTD6
- UniProtKB Q84MP1
- UniProtKB Q16QS5
- UniProtKB E1BNG3
- UniProtKB A3AMK8
- id GSCOCG00033548001
Descriptions
- Description Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR001650 | Helicase, C-terminal |
| IPR004179 | Sec63 domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR003593 | AAA+ ATPase domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR035892 | C2 domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.7.1.4 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2) |