Gene: Cc04_g11720

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g11720
  • Transcript Identifier Cc04_g11720.1
  • Gene Type Coding gene
  • Location chr4 : 12423313-12429213 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9C718
  • UniProtKB B9I3D5
  • UniProtKB I1MTD2
  • UniProtKB Q5QMN3
  • UniProtKB I1K042
  • UniProtKB Q8W4R3
  • id GSCOCG00037376001

Descriptions

  • Description DEAD-box ATP-dependent RNA helicase 30
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g112350.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g112350.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G63120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
16.2.1.1.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing regulator (DDX5)