Gene: Cc04_g03350
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g03350
- Transcript Identifier Cc04_g03350.1
- Gene Type Coding gene
- Location chr4 : 2489180-2490214 : negative
Gene Family Information
- ID HOM05D001472
- #Genes/#Species 431/100
- Phylogenetic origin
- ID ORTHO05D002655
- #Genes/#Species 272/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB A2XIZ4
- UniProtKB Q9ZPI1
- UniProtKB A3AJZ6
- UniProtKB Q43776
- UniProtKB Q6F2U9
- UniProtKB B9SY11
- id GSCOCG00022028001
Descriptions
- Description Lysine--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006430 | ISO | PLAZA Homology (enrichment) | lysyl-tRNA aminoacylation | HOM05D001472 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001472 |
| GO:0004824 | ISO | PLAZA Homology (enrichment) | lysine-tRNA ligase activity | HOM05D001472 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Homology (enrichment) | cytoplasm | HOM05D001472 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |