Gene: Cc03_g15940
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc03_g15940
- Transcript Identifier Cc03_g15940.1
- Gene Type Coding gene
- Location chr3 : 31648155-31653135 : negative
Gene Family Information
- ID HOM05D001480
- #Genes/#Species 429/100
- Phylogenetic origin
- ID ORTHO05D001331
- #Genes/#Species 430/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB B9SSZ3
- UniProtKB Q7ZWE3
- UniProtKB D7T2M5
- UniProtKB Q5XI01
- UniProtKB I1NCU5
- UniProtKB Q28G87
- id GSCOCG00001655001
Descriptions
- Description Putative RNA-binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G43970 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:1990904 | IEA | InterPro | ribonucleoprotein complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006630 | La-type HTH domain |
| IPR034878 | Plant La-related protein, RNA recognition motif |
| IPR002344 | Lupus La protein |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |