Gene: Cc02_g07960
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g07960
- Transcript Identifier Cc02_g07960.1
- Gene Type Coding gene
- Location chr2 : 6332990-6334233 : negative
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB O80928
- UniProtKB A5BZE7
- UniProtKB Q9M2U1
- UniProtKB D7TLT5
- UniProtKB F6HLD4
- UniProtKB Q9ZV33
- id GSCOCG00029870001
Descriptions
- Description Putative Dof zinc finger protein DOF3.6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT3G55370 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT3G55370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G55370 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G55370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G55370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |