Gene: Cc01_g17790
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc01_g17790
- Transcript Identifier Cc01_g17790.1
- Gene Type Coding gene
- Location chr1 : 35015800-35022316 : negative
Gene Family Information
- ID HOM05D000117
- #Genes/#Species 2876/97
- Phylogenetic origin
- ID ORTHO05D000070
- #Genes/#Species 2531/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB G9HPW0
- UniProtKB D9ZIN0
- UniProtKB F6HZR1
- UniProtKB Q38830
- UniProtKB Q38829
- UniProtKB Q38831
- id GSCOCG00016281001
Descriptions
- Description Putative Auxin-responsive protein IAA12
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT2G46990 |
| GO:0010262 | ISO | PLAZA Integrative Orthology | somatic embryogenesis | AT3G62100 |
| GO:0010600 | ISO | PLAZA Integrative Orthology | regulation of auxin biosynthetic process | Solyc09g064530.3 |
| GO:0010588 | ISO | PLAZA Integrative Orthology | cotyledon vascular tissue pattern formation | AT2G46990 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT2G46990 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT1G04100 |
| GO:0009647 | ISO | PLAZA Integrative Orthology | skotomorphogenesis | AT2G46990 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc09g064530.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT2G46990 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G28640 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G04100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 11.2.2.2 | Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX) |