Gene: Cc01_g15920

General Information

Structural Information

Species Coffea canephora
Gene Identifier Cc01_g15920
Transcript Identifier Cc01_g15920.1
Gene Type Coding gene
Location chr1 : 33723992-33725899 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

UniProtKB F6I261
UniProtKB Q9FI80
UniProtKB Q9FIF7
UniProtKB Q9SZT8
UniProtKB F6GZ71
UniProtKB B9GNH7
id GSCOCG00016503001

Descriptions

Short descriptions
Ortholog descriptions

Description Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT5G59200
GO:0031425	ISO	PLAZA Integrative Orthology	chloroplast RNA processing	AT5G59200

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G59200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.47	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (ELI1)