Gene: Cc01_g12960
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc01_g12960
- Transcript Identifier Cc01_g12960.1
- Gene Type Coding gene
- Location chr1 : 31457101-31459262 : negative
Gene Family Information
- ID HOM05D000114
- #Genes/#Species 2914/98
- Phylogenetic origin
- ID ORTHO05D000075
- #Genes/#Species 2458/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB G4XZW7
- UniProtKB G4XZW8
- UniProtKB Q852A1
- UniProtKB G4XZY3
- UniProtKB O48818
- UniProtKB Q38865
- id GSCOCG00028253001
Descriptions
- Description Expansin-A4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009664 | IEA | InterPro | plant-type cell wall organization | |
| GO:0006949 | ISO | PLAZA Integrative Orthology | syncytium formation | AT2G28950 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | InterPro | extracellular region | |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT2G28950 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036749 | Expansin, cellulose-binding-like domain superfamily |
| IPR007118 | Expansin/Lol pI |
| IPR036908 | RlpA-like domain superfamily |
| IPR009009 | RlpA-like protein, double-psi beta-barrel domain |
| IPR007117 | Expansin, cellulose-binding-like domain |
| IPR002963 | Expansin |
| IPR007112 | Expansin/pollen allergen, DPBB domain |
| Mapman id | Description |
|---|---|
| 21.4.2.1 | Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin |