Gene: Cc01_g04650

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc01_g04650
  • Transcript Identifier Cc01_g04650.1
  • Gene Type Coding gene
  • Location chr1 : 15431267-15434919 : negative

Gene Family Information

  • ID HOM05D001934
  • #Genes/#Species 342/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9W1H4
  • UniProtKB F6GW85
  • UniProtKB B9SCJ7
  • UniProtKB Q869E1
  • UniProtKB B9HQN9
  • UniProtKB Q42572
  • id GSCOCG00041209001

Descriptions

  • Description DNA ligase 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:0071897
IEA
InterProDNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003910
IEA
InterProDNA ligase (ATP) activity
GO:0005524
IEA
InterProATP binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D001934

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012309 DNA ligase, ATP-dependent, C-terminal
IPR012340 Nucleic acid-binding, OB-fold
IPR000977 DNA ligase, ATP-dependent
IPR012310 DNA ligase, ATP-dependent, central
Mapman id Description
50.6.5 Enzyme classification.EC_6 ligases.EC_6.5 ligase forming phosphoric ester bond