Gene: Cc00_g07300
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g07300
- Transcript Identifier Cc00_g07300.1
- Gene Type Coding gene
- Location chr0 : 58910240-58915125 : negative
Gene Family Information
- ID HOM05D000545
- #Genes/#Species 1002/98
- Phylogenetic origin
- ID ORTHO05D000539
- #Genes/#Species 801/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB Q945M9
- UniProtKB Q9LXV5
- UniProtKB Q93ZH2
- UniProtKB A5BU97
- UniProtKB I1KYS9
- UniProtKB A5PGU3
- id GSCOCG00009770001
Descriptions
- Description Putative Nuclear transcription factor Y subunit A-1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010262 | ISO | PLAZA Integrative Orthology | somatic embryogenesis | AT5G12840 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G20910 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G12840 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT5G12840 |
| GO:0055046 | ISO | PLAZA Integrative Orthology | microgametogenesis | AT5G12840 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G12840 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G20910 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G20910 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G12840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001289 | Nuclear transcription factor Y subunit A |
| Mapman id | Description |
|---|---|
| 15.5.49.1 | RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YA |