Gene: Carub.0015s0005
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0015s0005
- Transcript Identifier Carub.0015s0005.1
- Gene Type Coding gene
- Location scaffold_15 : 27129-28406 : negative
Gene Family Information
- ID HOM05D000911
- #Genes/#Species 657/100
- Phylogenetic origin
- ID ORTHO05D000890
- #Genes/#Species 568/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0015s0005.v1.1
- pacid 39253224
- synonym Carubv10008007m.g
Descriptions
- Description 4.2.1.91 - Arogenate dehydratase / Carboxycyclohexadienyl dehydratase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009094 | IEA | InterPro | L-phenylalanine biosynthetic process | |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT3G44720 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT3G44720 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004664 | IEA | InterPro | prephenate dehydratase activity | |
| GO:0047769 | ISO | PLAZA Integrative Orthology | arogenate dehydratase activity | AT3G44720 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G44720 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001086 | Prephenate dehydratase |
| Mapman id | Description |
|---|---|
| 4.1.5.2.4 | Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) |