Gene: Carub.0008s2831

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2831
  • Transcript Identifier Carub.0008s2831.1
  • Gene Type Coding gene
  • Location scaffold_8 : 13267005-13268868 : positive

Gene Family Information

  • ID HOM05D000565
  • #Genes/#Species 980/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2831.v1.1
  • pacid 39253143
  • synonym Carubv10026639m.g

Descriptions

  • Description PTHR19384//PTHR19384:SF82 - FLAVODOXIN-RELATED // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis Zm00001eb379240
GO:0009767
ISO
PLAZA Integrative Orthologyphotosynthetic electron transport chain AT5G66190
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G66190
GO:0022900
ISO
PLAZA Integrative Orthologyelectron transport chain Zm00001eb379240
GO:0007166
ISO
PLAZA Homology (enrichment)cell surface receptor signaling pathway HOM05D000565

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016653
ISO
PLAZA Integrative Orthologyoxidoreductase activity, acting on NAD(P)H, heme protein as acceptor Zm00001eb379240
GO:0003959
ISO
PLAZA Integrative OrthologyNADPH dehydrogenase activity Zm00001eb379240
GO:0045156
ISO
PLAZA Integrative Orthologyelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity AT5G66190
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb379240
GO:0003954
ISO
PLAZA Integrative OrthologyNADH dehydrogenase activity Zm00001eb379240
GO:0016491
IEA
InterProoxidoreductase activity
GO:0008266
ISO
PLAZA Integrative Orthologypoly(U) RNA binding AT5G66190
GO:0045157
ISO
PLAZA Integrative Orthologyelectron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity AT5G66190
GO:0009055
ISO
PLAZA Integrative Orthologyelectron transfer activity Zm00001eb379240
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G66190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G66190
GO:0098807
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane protein complex Os02g0103800
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G66190
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT5G66190
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G66190
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G66190
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT5G66190
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G66190
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G66190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017938 Riboflavin synthase-like beta-barrel
IPR035442 Ferredoxin--NADP reductase, plant and Cyanobacteria type
IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain
IPR015701 Ferredoxin--NADP reductase
IPR001433 Oxidoreductase FAD/NAD(P)-binding
IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase
Mapman id Description
1.1.5.2.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase