Gene: Carub.0008s2473

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2473
  • Transcript Identifier Carub.0008s2473.1
  • Gene Type Coding gene
  • Location scaffold_8 : 11953939-11960190 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2473.v1.1
  • pacid 39252217
  • synonym Carubv10025781m.g

Descriptions

  • Description PTHR10799//PTHR10799:SF654 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045951
ISO
PLAZA Integrative Orthologypositive regulation of mitotic recombination AT5G63950
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development Os04g0692750
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G63950
GO:0010965
ISO
PLAZA Integrative Orthologyregulation of mitotic sister chromatid separation Os04g0692750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os04g0692750
GO:0005694
ISO
PLAZA Integrative Orthologychromosome Os04g0692750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR000330 SNF2, N-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038718 SNF2-like, N-terminal domain superfamily
Mapman id Description
12.4.8.2.3 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (ERCC6)